PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.DH5CE
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 562aa    MW: 63525.3 Da    PI: 4.3285
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.DH5CEgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000313473851354
                  HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  R+ri +++ +Lr+++P     + k  s    Le  ++Y++ L
  Araip.DH5CE 347 RQRIQDCIRQLRTIIPGK---NVKECSIDNLLECSIRYMSFL 385
                  89**************98...667788888888888888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.861334385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    Send to blast
MDSENYDLDE FLASISFDCL YDSNPNNPSV SIYELDSLHE PQLSLSDMDH NNGLVLKCNG  60
STKCFTDQDP FFDPLEEQVL YESALTSLCI TNNSMENQHS NQVIMAEADF PSSSEVSKNL  120
LEPIDVSEEF LNFTSVDDIC QWFDPSQEDN NSNTFLEPMQ CDATSFSWKS VMDSYENCLL  180
GSKEPESNLI APAASSADDT TIFECLSEFD FDVPTMLFSD SSIEELLNCE EAICNNPLNN  240
GSSSVLELSS ENNKMEMMEN ISNPMNFTKN LAWFEARNNL TQPVPDLDTT NKIKRKKVQL  300
GLVMDDSHSI KLGETILVPP RKKEEPKKPS KKKDKAGVGS RPRPKDRQRI QDCIRQLRTI  360
IPGKNVKECS IDNLLECSIR YMSFLSSTAH YANKLQEPDK PKLIEQANGV VLQESSVEGS  420
KYCGTWSFEE PHQTLLCPII VEDMSHPGQM LIELLCEEEG FSLEMVDTIK GLGLNILKAK  480
METRNKKLWA RFIVEANRHV TKIDVFWSLL HLVEQKNSSG TGMDSSTNNN KYCNVMNDSS  540
VSRLDKQQQE KESCNLFMSR TE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016206222.10.0PREDICTED: transcription factor bHLH157-like
TrEMBLA0A151RKJ11e-128A0A151RKJ1_CAJCA; Putative basic helix-loop-helix protein At1g64625 family
STRINGGLYMA10G31691.11e-126(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69551621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.12e-29conserved peptide upstream open reading frame 7